Filters

Classes
class	MR::Filter::Base
class	MR::Filter::ConnectedComponents
class	MR::Filter::Dilate
	a filter to dilate a mask More...
class	MR::Filter::DWIBrainMask
	a filter to compute a whole brain mask from a DWI image. More...
class	MR::Filter::Erode
	a filter to erode a mask More...
class	MR::Filter::FFT
	a filter to perform an FFT on an image More...
class	MR::Filter::FFT::FFTKernel< ComplexImageType >
class	MR::Filter::Gradient
class	MR::Filter::MaskClean
	a filter to clean up masks typically output by DWIBrainMask filter More...
class	MR::Filter::Median
class	MR::Filter::Normalise
class	MR::Filter::OptimalThreshold
	a filter to compute the optimal threshold to mask a DataSet. More...
class	MR::Filter::Resize
class	MR::Filter::Smooth
class	MR::Fixel::Filter::Connect
class	MR::Fixel::Filter::Smooth

Functions
template<class ImageType >
void	MR::Filter::fft (ImageType &&vox, const size_t axis, const bool inverse=false)

Variables
const bool	MR::Filter::FFT::inverse
vector< size_t >	MR::Filter::FFT::axes_to_process
bool	MR::Filter::FFT::centre_zero_
ComplexImageType	MR::Filter::FFT::FFTKernel< ComplexImageType >::vox
Eigen::Matrix< cdouble, Eigen::Dynamic, 1 >	MR::Filter::FFT::FFTKernel< ComplexImageType >::data_in
Eigen::Matrix< cdouble, Eigen::Dynamic, 1 >	MR::Filter::FFT::FFTKernel< ComplexImageType >::data_out
Eigen::FFT< double >	MR::Filter::FFT::FFTKernel< ComplexImageType >::fft
size_t	MR::Filter::FFT::FFTKernel< ComplexImageType >::axis
bool	MR::Filter::FFT::FFTKernel< ComplexImageType >::inverse

Detailed Description

Function Documentation

fft()

template<class ImageType >

void MR::Filter::fft	(	ImageType &&	vox,
		const size_t	axis,
		const bool	inverse = false
	)

Definition at line 163 of file fft.h.

Variable Documentation

axes_to_process

vector<size_t> MR::Filter::FFT::axes_to_process

protected

Definition at line 125 of file fft.h.

axis

template<class ComplexImageType >

size_t MR::Filter::FFT::FFTKernel< ComplexImageType >::axis

protected

Definition at line 154 of file fft.h.

centre_zero_

bool MR::Filter::FFT::centre_zero_

protected

Definition at line 126 of file fft.h.

data_in

template<class ComplexImageType >

Eigen::Matrix<cdouble, Eigen::Dynamic, 1> MR::Filter::FFT::FFTKernel< ComplexImageType >::data_in

protected

Definition at line 152 of file fft.h.

data_out

template<class ComplexImageType >

Eigen::Matrix<cdouble, Eigen::Dynamic, 1> MR::Filter::FFT::FFTKernel< ComplexImageType >::data_out

protected

Definition at line 152 of file fft.h.

fft

template<class ComplexImageType >

Eigen::FFT<double> MR::Filter::FFT::FFTKernel< ComplexImageType >::fft

protected

Definition at line 153 of file fft.h.

inverse [1/2]

const bool MR::Filter::FFT::inverse

protected

Definition at line 124 of file fft.h.

inverse [2/2]

template<class ComplexImageType >

bool MR::Filter::FFT::FFTKernel< ComplexImageType >::inverse

protected

Definition at line 155 of file fft.h.

vox

template<class ComplexImageType >

ComplexImageType MR::Filter::FFT::FFTKernel< ComplexImageType >::vox

protected

Definition at line 151 of file fft.h.