MR::Fixel::Filter::Smooth Class Reference

#include "fixel/filter/smooth.h"

Inheritance diagram for MR::Fixel::Filter::Smooth:

Protected Attributes
Image< bool >	mask_image
Matrix::Reader	matrix
vector< Eigen::Vector3f >	fixel_positions
float	stdev
float	gaussian_const1
float	gaussian_const2
float	threshold
Protected Attributes inherited from MR::Fixel::Filter::Base
std::string	message

Detailed Description

Smooth fixel data using a fixel-fixel connectivity matrix.

Typical usage:

auto fixel_index = Image<index_type>::open (index_image_path);
auto fixel_data_in = Image<float>::open (fixel_data_path);
auto fixel_matrix = Fixel::Matrix::Reader (fixel_matrix_path);
Fixel::Filter::Smooth smooth_filter (fixel_index, fixel_matrix);
auto fixel_data_out = Image::create<float> (fixel_data_out, fixel_data_in);
smooth_filter (fixel_data_in, fixel_data_out);

Definition at line 53 of file smooth.h.

Member Data Documentation

fixel_positions

vector<Eigen::Vector3f> MR::Fixel::Filter::Smooth::fixel_positions

protected

Definition at line 79 of file smooth.h.

gaussian_const1

float MR::Fixel::Filter::Smooth::gaussian_const1

protected

Definition at line 80 of file smooth.h.

gaussian_const2

float MR::Fixel::Filter::Smooth::gaussian_const2

protected

Definition at line 80 of file smooth.h.

mask_image

Image<bool> MR::Fixel::Filter::Smooth::mask_image

protected

Definition at line 77 of file smooth.h.

matrix

Matrix::Reader MR::Fixel::Filter::Smooth::matrix

protected

Definition at line 78 of file smooth.h.

stdev

float MR::Fixel::Filter::Smooth::stdev

protected

Definition at line 80 of file smooth.h.

threshold

float MR::Fixel::Filter::Smooth::threshold

protected

Definition at line 80 of file smooth.h.

---

The documentation for this class was generated from the following file:

• src/fixel/filter/smooth.h