MR::DWI::Tractography::SIFT::SIFTer Member List

This is the complete list of members for MR::DWI::Tractography::SIFT::SIFTer, including all inherited members.

act_5tt	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
calc_cost_function() const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
calc_gradient(const track_t, const double, const double) const	MR::DWI::Tractography::SIFT::SIFTer	protected
calc_roc_cost_function() const	MR::DWI::Tractography::SIFT::SIFTer	protected
check_TD()	MR::DWI::Tractography::SIFT::Model< Fixel >
contributions	MR::DWI::Tractography::SIFT::Model< Fixel >	protected
csv_path	MR::DWI::Tractography::SIFT::SIFTer	protected
dirs	MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel >	protected
dixel2fixel(const Dixel &) const	MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel >	protected
enforce_quantisation	MR::DWI::Tractography::SIFT::SIFTer	protected
Fixel_TD_map(const Header &H, const DWI::Directions::FastLookupSet &directions)	MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel >	inline
Fixel_TD_map(const Fixel_TD_map &)=delete	MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel >
fixels	MR::DWI::Fixel_map< Fixel >	protected
FOD_sum	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
have_act_data() const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	inline
have_null_lobes	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
map_streamlines(const std::string &)	MR::DWI::Tractography::SIFT::Model< Fixel >
Model(Set &dwi, const DWI::Directions::FastLookupSet &dirs)	MR::DWI::Tractography::SIFT::Model< Fixel >	inline
Model(const Model &that)=delete	MR::DWI::Tractography::SIFT::Model< Fixel >
ModelBase(Image< float > &dwi, const DWI::Directions::FastLookupSet &dirs)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	inline
ModelBase(const ModelBase &)=delete	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
mu() const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	inline
num_tracks() const	MR::DWI::Tractography::SIFT::Model< Fixel >	inline
operator()(const FMLS::FOD_lobes &in)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	virtual
operator()(const Mapping::SetDixel &in)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	virtual
output_5tt_image(const std::string &)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
output_all_debug_images(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
output_at_counts	MR::DWI::Tractography::SIFT::SIFTer	protected
output_debug	MR::DWI::Tractography::SIFT::SIFTer	protected
output_error_fixel_images(const std::string &, const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_error_images(const std::string &, const std::string &, const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_filtered_tracks(const std::string &, const std::string &) const	MR::DWI::Tractography::SIFT::SIFTer
output_fixel_count_image(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_non_contributing_streamlines(const std::string &) const	MR::DWI::Tractography::SIFT::Model< Fixel >
output_proc_mask(const std::string &)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
output_scatterplot(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_selection(const std::string &) const	MR::DWI::Tractography::SIFT::SIFTer
output_target_image(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_target_image_fixel(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_target_image_sh(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_tdi(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_tdi_fixel(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_tdi_null_lobes(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_tdi_sh(const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
output_untracked_fixels(const std::string &, const std::string &) const	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
perform_filtering()	MR::DWI::Tractography::SIFT::SIFTer
perform_FOD_segmentation(Image< float > &)	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
proc_mask	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
remove_excluded_fixels()	MR::DWI::Tractography::SIFT::Model< Fixel >
scale_FDs_by_GM()	MR::DWI::Tractography::SIFT::ModelBase< Fixel >
set_csv_path(const std::string &i)	MR::DWI::Tractography::SIFT::SIFTer	inline
set_regular_outputs(const vector< uint32_t > &, const bool)	MR::DWI::Tractography::SIFT::SIFTer
set_term_mu(const float i)	MR::DWI::Tractography::SIFT::SIFTer	inline
set_term_number(const track_t i)	MR::DWI::Tractography::SIFT::SIFTer	inline
set_term_ratio(const float i)	MR::DWI::Tractography::SIFT::SIFTer	inline
SIFTer(Image< float > &i, const DWI::Directions::FastLookupSet &d)	MR::DWI::Tractography::SIFT::SIFTer	inline
SIFTer(const SIFTer &that)=delete	MR::DWI::Tractography::SIFT::SIFTer
tck_file_path	MR::DWI::Tractography::SIFT::Model< Fixel >	protected
TD_sum	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	protected
term_mu	MR::DWI::Tractography::SIFT::SIFTer	protected
term_number	MR::DWI::Tractography::SIFT::SIFTer	protected
term_ratio	MR::DWI::Tractography::SIFT::SIFTer	protected
test_sorting_block_size(const size_t) const	MR::DWI::Tractography::SIFT::SIFTer
~Fixel_TD_map()	MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel >	inlinevirtual
~Model()	MR::DWI::Tractography::SIFT::Model< Fixel >	virtual
~ModelBase()	MR::DWI::Tractography::SIFT::ModelBase< Fixel >	inlinevirtual
~SIFTer()	MR::DWI::Tractography::SIFT::SIFTer	inline