Pre-compiled versions of MRtrix3 are available for download for all major operating systems, and these are the quickest and simplest way of getting started with MRtrix3. You’ll find specific instructions on how to install them below.

If you need to compile and install MRtrix3 from source, you’ll find instructions for all major operating systems on our documentation site. The process is also generally relatively simple, but it does require more computing resources and expertise.

GNU/Linux

macOS

Microsoft Windows