connectome.h File Reference

#include <Eigen/Dense>
#include "app.h"
#include "exception.h"
#include "header.h"
#include "mrtrix.h"
#include "types.h"
#include <map>
#include "image.h"
#include "types.h"
#include "misc/bitset.h"
#include "surface/mesh.h"
#include "gui/opengl/gl.h"
#include "gui/opengl/lighting.h"
#include "gui/opengl/shader.h"
#include "gui/lighting_dock.h"
#include "gui/mrview/adjust_button.h"
#include "gui/mrview/colourmap_button.h"
#include "gui/mrview/spin_box.h"
#include "gui/mrview/mode/base.h"
#include "gui/mrview/tool/base.h"
#include "gui/shapes/cube.h"
#include "gui/shapes/cylinder.h"
#include "gui/shapes/sphere.h"
#include "gui/color_button.h"
#include "gui/projection.h"
#include "connectome/mat2vec.h"
#include "connectome/lut.h"
#include "gui/mrview/tool/connectome/colourmap_observers.h"
#include "gui/mrview/tool/connectome/edge.h"
#include "gui/mrview/tool/connectome/file_data_vector.h"
#include "gui/mrview/tool/connectome/matrix_list.h"
#include "gui/mrview/tool/connectome/node.h"
#include "gui/mrview/tool/connectome/node_list.h"
#include "gui/mrview/tool/connectome/node_overlay.h"
#include "gui/mrview/tool/connectome/selection.h"
#include "gui/mrview/tool/connectome/shaders.h"

Go to the source code of this file.

Classes
class	MR::GUI::MRView::Tool::Connectome

Namespaces
namespace	MR
namespace	MR::Connectome
namespace	MR::GUI
namespace	MR::GUI::MRView
namespace	MR::GUI::MRView::Tool

Typedefs
using	MR::Connectome::node_t = uint32_t
using	MR::Connectome::value_type = default_type
using	MR::Connectome::matrix_type = Eigen::Array< value_type, Eigen::Dynamic, Eigen::Dynamic >
using	MR::Connectome::vector_type = Eigen::Array< value_type, Eigen::Dynamic, 1 >
using	MR::Connectome::mask_type = Eigen::Array< bool, Eigen::Dynamic, Eigen::Dynamic >

Functions
template<class MatrixType >
void	MR::Connectome::check (const MatrixType &in, const node_t num_nodes=0)
template<class MatrixType >
bool	MR::Connectome::is_directed (MatrixType &in)
template<class MatrixType >
void	MR::Connectome::to_symmetric (MatrixType &in)
template<class MatrixType >
void	MR::Connectome::to_upper (MatrixType &in)
void	MR::Connectome::check (const Header &)

Variables
const App::OptionGroup	MR::Connectome::MatrixOutputOptions