stride.h File Reference

#include "app.h"
#include "types.h"
#include "debug.h"
#include "datatype.h"
#include "math/math.h"

Go to the source code of this file.

Namespaces
namespace	MR
namespace	MR::Stride
	Functions to handle the memory layout of images.

Typedefs
using	MR::Stride::List = vector< ssize_t >

Functions
template<class HeaderType >
List	MR::Stride::get (const HeaderType &header)
	return the strides of header as a vector<ssize_t> More...
template<class HeaderType >
void	MR::Stride::set (HeaderType &header, const List &stride)
	set the strides of header from a vector<ssize_t> More...
template<class HeaderType , class FromHeaderType >
void	MR::Stride::set (HeaderType &header, const FromHeaderType &from)
	set the strides of header from another HeaderType More...
template<class HeaderType >
vector< size_t >	MR::Stride::order (const HeaderType &header, size_t from_axis=0, size_t to_axis=std::numeric_limits< size_t >::max())
	sort range of axes with respect to their absolute stride. More...
template<>
vector< size_t >	MR::Stride::order< List > (const List &strides, size_t from_axis, size_t to_axis)
	sort axes with respect to their absolute stride. More...
template<class HeaderType >
void	MR::Stride::sanitise (HeaderType &header)
	remove duplicate and invalid strides. More...
template<class HeaderType >
void	MR::Stride::sanitise (List &strides, const HeaderType &header)
	remove duplicate and invalid strides. More...
List &	MR::Stride::sanitise (List &current, const List &desired, const vector< ssize_t > &header)
	remove duplicate and invalid strides. More...
template<class HeaderType >
void	MR::Stride::actualise (HeaderType &header)
	convert strides from symbolic to actual strides More...
template<class HeaderType >
void	MR::Stride::actualise (List &strides, const HeaderType &header)
	convert strides from symbolic to actual strides More...
template<class HeaderType >
List	MR::Stride::get_actual (HeaderType &header)
	get actual strides: More...
template<class HeaderType >
List	MR::Stride::get_actual (const List &strides, const HeaderType &header)
	get actual strides: More...
template<class HeaderType >
void	MR::Stride::symbolise (HeaderType &header)
	convert strides from actual to symbolic strides More...
template<>
void	MR::Stride::symbolise (List &strides)
	convert strides from actual to symbolic strides More...
template<class HeaderType >
List	MR::Stride::get_symbolic (const HeaderType &header)
	get symbolic strides: More...
template<>
List	MR::Stride::get_symbolic (const List &list)
	get symbolic strides: More...
template<class HeaderType >
size_t	MR::Stride::offset (const HeaderType &header)
	calculate offset to start of data More...
template<class HeaderType >
size_t	MR::Stride::offset (List &strides, const HeaderType &header)
	calculate offset to start of data More...
template<class HeaderType >
List	MR::Stride::get_nearest_match (const HeaderType &current, const List &desired)
	produce strides from current that match those specified in desired More...
List	MR::Stride::contiguous_along_axis (size_t axis)
	convenience function to get volume-contiguous strides More...
template<class HeaderType >
List	MR::Stride::contiguous_along_axis (size_t axis, const HeaderType &header)
	convenience function to get volume-contiguous strides More...
template<class HeaderType >
List	MR::Stride::contiguous_along_spatial_axes (const HeaderType &header)
	convenience function to get spatially contiguous strides More...
List	MR::Stride::__from_command_line (const List &current)
template<class HeaderType >
void	MR::Stride::set_from_command_line (HeaderType &header, const List &default_strides=List())

Variables
const App::OptionGroup	MR::Stride::Options