MR::Fixel::Matrix Namespace Reference

Classes
class	InitElement
class	InitFixel
class	NormElement
class	NormFixel
class	Reader

Typedefs
using	index_image_type = uint64_t
using	fixel_index_type = uint32_t
using	count_type = uint32_t
using	connectivity_value_type = float
using	init_matrix_type = vector< InitFixel >

Functions
init_matrix_type	generate (const std::string &track_filename, Image< fixel_index_type > &index_image, Image< bool > &fixel_mask, const float angular_threshold)
void	normalise_and_write (init_matrix_type &matrix, const connectivity_value_type threshold, const std::string &path, const KeyValues &keyvals=KeyValues())

Typedef Documentation

connectivity_value_type

using MR::Fixel::Matrix::connectivity_value_type = typedef float

Definition at line 39 of file matrix.h.

count_type

using MR::Fixel::Matrix::count_type = typedef uint32_t

Definition at line 38 of file matrix.h.

fixel_index_type

using MR::Fixel::Matrix::fixel_index_type = typedef uint32_t

Definition at line 37 of file matrix.h.

index_image_type

using MR::Fixel::Matrix::index_image_type = typedef uint64_t

Definition at line 36 of file matrix.h.

init_matrix_type

using MR::Fixel::Matrix::init_matrix_type = typedef vector<InitFixel>

Definition at line 144 of file matrix.h.

Function Documentation

generate()

init_matrix_type MR::Fixel::Matrix::generate	(	const std::string &	track_filename,
		Image< fixel_index_type > &	index_image,
		Image< bool > &	fixel_mask,
		const float	angular_threshold
	)

normalise_and_write()

void MR::Fixel::Matrix::normalise_and_write	(	init_matrix_type &	matrix,
		const connectivity_value_type	threshold,
		const std::string &	path,
		const KeyValues &	keyvals = KeyValues()
	)