act_5tt | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
calc_cost_function() const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
count | MR::DWI::Tractography::Seeding::Base | protected |
dirs | MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel_TD_seed > | protected |
dixel2fixel(const Dixel &) const | MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel_TD_seed > | protected |
Dynamic(const std::string &, Image< float > &, const size_t, const DWI::Directions::FastLookupSet &) | MR::DWI::Tractography::Seeding::Dynamic | |
Dynamic(const Dynamic &)=delete | MR::DWI::Tractography::Seeding::Dynamic | |
Fixel_TD_map(const Header &H, const DWI::Directions::FastLookupSet &directions) | MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel_TD_seed > | inline |
Fixel_TD_map(const Fixel_TD_map &)=delete | MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel_TD_seed > | |
fixels | MR::DWI::Fixel_map< Fixel_TD_seed > | protected |
FOD_sum | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
get_seed(Eigen::Vector3f &) const override | MR::DWI::Tractography::Seeding::Dynamic | virtual |
get_seed(Eigen::Vector3f &, Eigen::Vector3f &) override | MR::DWI::Tractography::Seeding::Dynamic | virtual |
have_act_data() const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | inline |
have_null_lobes | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
map_streamlines(const std::string &) | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
ModelBase(Image< float > &dwi, const DWI::Directions::FastLookupSet &dirs) | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | inline |
ModelBase(const ModelBase &)=delete | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
mu() const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | inline |
mutex | MR::DWI::Tractography::Seeding::Base | mutableprotected |
operator()(const FMLS::FOD_lobes &) override | MR::DWI::Tractography::Seeding::Dynamic | virtual |
operator()(const Mapping::SetDixel &i) override | MR::DWI::Tractography::Seeding::Dynamic | inlinevirtual |
operator=(const Dynamic &)=delete | MR::DWI::Tractography::Seeding::Dynamic | |
output_5tt_image(const std::string &) | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
output_all_debug_images(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
output_error_fixel_images(const std::string &, const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_error_images(const std::string &, const std::string &, const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_fixel_count_image(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_proc_mask(const std::string &) | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
output_scatterplot(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_target_image(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_target_image_fixel(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_target_image_sh(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_tdi(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_tdi_fixel(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_tdi_null_lobes(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_tdi_sh(const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
output_untracked_fixels(const std::string &, const std::string &) const | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
perform_FOD_segmentation(Image< float > &) | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
proc_mask | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
scale_FDs_by_GM() | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | |
TD_sum | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | protected |
type | MR::DWI::Tractography::Seeding::Base | protected |
volume | MR::DWI::Tractography::Seeding::Base | protected |
~Dynamic() | MR::DWI::Tractography::Seeding::Dynamic | |
~Fixel_TD_map() | MR::DWI::Tractography::Mapping::Fixel_TD_map< Fixel_TD_seed > | inlinevirtual |
~ModelBase() | MR::DWI::Tractography::SIFT::ModelBase< Fixel_TD_seed > | inlinevirtual |