Namespaces | |
namespace | Gaussian |
Classes | |
class | BufferScratchDump |
class | Dixel |
class | DixelMappingPlugin |
class | Fixel_TD_map |
class | MapWriter |
class | MapWriterBase |
class | SetDixel |
class | SetVoxel |
class | SetVoxelDEC |
class | SetVoxelDir |
class | SetVoxelExtras |
class | SetVoxelTOD |
class | TODMappingPlugin |
class | TrackLoader |
class | TrackMapperBase |
class | TrackMapperTWI |
class | TWDFCDynamicImagePlugin |
class | TWDFCStaticImagePlugin |
class | TWIFODImagePlugin |
class | TWIImagePluginBase |
class | TWIScalarImagePlugin |
class | Voxel |
class | VoxelDEC |
class | VoxelDir |
class | VoxelTOD |
Enumerations | |
enum | contrast_t { TDI , LENGTH , INVLENGTH , SCALAR_MAP , SCALAR_MAP_COUNT , FOD_AMP , CURVATURE , VECTOR_FILE } |
enum | vox_stat_t { V_SUM , V_MIN , V_MEAN , V_MAX } |
enum | tck_stat_t { T_SUM , T_MIN , T_MEAN , T_MAX , T_MEDIAN , T_MEAN_NONZERO , GAUSSIAN , ENDS_MIN , ENDS_MEAN , ENDS_MAX , ENDS_PROD , ENDS_CORR } |
enum | writer_dim { UNDEFINED , GREYSCALE , DEC , DIXEL , TOD } |
Functions | |
size_t | determine_upsample_ratio (const Header &, const float, const float) |
size_t | determine_upsample_ratio (const Header &, const std::string &, const float) |
size_t | determine_upsample_ratio (const Header &, const Tractography::Properties &, const float) |
void | generate_header (Header &, const std::string &, const vector< default_type > &) |
void | oversample_header (Header &, const vector< default_type > &) |
template<typename T > | |
Eigen::Vector3i | round (const Eigen::Matrix< T, 3, 1 > &p) |
template<class HeaderType > | |
bool | check (const Eigen::Vector3i &V, const HeaderType &H) |
Eigen::Vector3d | vec2DEC (const Eigen::Vector3d &d) |
std::ostream & | operator<< (std::ostream &, const Voxel &) |
std::ostream & | operator<< (std::ostream &, const VoxelDEC &) |
std::ostream & | operator<< (std::ostream &, const VoxelDir &) |
std::ostream & | operator<< (std::ostream &, const Dixel &) |
std::ostream & | operator<< (std::ostream &, const VoxelTOD &) |
Variables | |
const char * | contrasts [] |
const char * | voxel_statistics [] |
const char * | track_statistics [] |
const char * | writer_dims [] |
Enumerator | |
---|---|
TDI | |
LENGTH | |
INVLENGTH | |
SCALAR_MAP | |
SCALAR_MAP_COUNT | |
FOD_AMP | |
CURVATURE | |
VECTOR_FILE |
Definition at line 27 of file twi_stats.h.
Enumerator | |
---|---|
T_SUM | |
T_MIN | |
T_MEAN | |
T_MAX | |
T_MEDIAN | |
T_MEAN_NONZERO | |
GAUSSIAN | |
ENDS_MIN | |
ENDS_MEAN | |
ENDS_MAX | |
ENDS_PROD | |
ENDS_CORR |
Definition at line 30 of file twi_stats.h.
Enumerator | |
---|---|
V_SUM | |
V_MIN | |
V_MEAN | |
V_MAX |
Definition at line 28 of file twi_stats.h.
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inline |
size_t MR::DWI::Tractography::Mapping::determine_upsample_ratio | ( | const Header & | , |
const float | , | ||
const float | |||
) |
size_t MR::DWI::Tractography::Mapping::determine_upsample_ratio | ( | const Header & | , |
const std::string & | , | ||
const float | |||
) |
size_t MR::DWI::Tractography::Mapping::determine_upsample_ratio | ( | const Header & | , |
const Tractography::Properties & | , | ||
const float | |||
) |
void MR::DWI::Tractography::Mapping::generate_header | ( | Header & | , |
const std::string & | , | ||
const vector< default_type > & | |||
) |
std::ostream & MR::DWI::Tractography::Mapping::operator<< | ( | std::ostream & | , |
const Dixel & | |||
) |
std::ostream & MR::DWI::Tractography::Mapping::operator<< | ( | std::ostream & | , |
const Voxel & | |||
) |
std::ostream & MR::DWI::Tractography::Mapping::operator<< | ( | std::ostream & | , |
const VoxelDEC & | |||
) |
std::ostream & MR::DWI::Tractography::Mapping::operator<< | ( | std::ostream & | , |
const VoxelDir & | |||
) |
std::ostream & MR::DWI::Tractography::Mapping::operator<< | ( | std::ostream & | , |
const VoxelTOD & | |||
) |
void MR::DWI::Tractography::Mapping::oversample_header | ( | Header & | , |
const vector< default_type > & | |||
) |
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inline |
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inline |
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extern |
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extern |
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extern |
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extern |