MR::Filter::ZClean Class Reference

#include "filter/zclean.h"

Inheritance diagram for MR::Filter::ZClean:

Protected Member Functions
template<typename ImageType , typename MaskType >
void	calculate_median_mad (ImageType &image, MaskType &mask, size_t nvoxels, float &median, float &mad)
Protected Member Functions inherited from MR::Header
void	acquire_io (Header &H)
void	check (const Header &H) const
void	realign_transform ()
	realign transform to match RAS coordinate system as closely as possible More...
void	sanitise_voxel_sizes ()
void	sanitise_transform ()
void	sanitise_strides ()

Protected Attributes
float	zupper
float	zlower
float	fov_max
float	fov_min
size_t	bridge
bool	dont_maskupper
bool	keep_lower
bool	keep_upper
float	upper
float	lower
Protected Attributes inherited from MR::Filter::Base
std::string	message
Protected Attributes inherited from MR::Header
vector< Axis >	axes_
transform_type	transform_
std::string	name_
KeyValues	keyval_
const char *	format_
std::unique_ptr< ImageIO::Base >	io
	additional information relevant for images stored on file More...
DataType	datatype_
	the type of the data as stored on file More...
default_type	offset_
	the values by which to scale the intensities More...
default_type	scale_
std::array< size_t, 3 >	realign_perm_
std::array< bool, 3 >	realign_flip_

Detailed Description

Definition at line 40 of file zclean.h.

Member Function Documentation

calculate_median_mad()

template<typename ImageType , typename MaskType >

void MR::Filter::ZClean::calculate_median_mad ( ImageType &  image, MaskType &  mask, size_t  nvoxels, float &  median, float &  mad  )

inlineprotected

Definition at line 305 of file zclean.h.

Member Data Documentation

bridge

size_t MR::Filter::ZClean::bridge

protected

Definition at line 300 of file zclean.h.

dont_maskupper

bool MR::Filter::ZClean::dont_maskupper

protected

Definition at line 301 of file zclean.h.

fov_max

float MR::Filter::ZClean::fov_max

protected

Definition at line 299 of file zclean.h.

fov_min

float MR::Filter::ZClean::fov_min

protected

Definition at line 299 of file zclean.h.

keep_lower

bool MR::Filter::ZClean::keep_lower

protected

Definition at line 301 of file zclean.h.

keep_upper

bool MR::Filter::ZClean::keep_upper

protected

Definition at line 301 of file zclean.h.

lower

float MR::Filter::ZClean::lower

protected

Definition at line 302 of file zclean.h.

upper

float MR::Filter::ZClean::upper

protected

Definition at line 302 of file zclean.h.

zlower

float MR::Filter::ZClean::zlower

protected

Definition at line 298 of file zclean.h.

zupper

float MR::Filter::ZClean::zupper

protected

Definition at line 298 of file zclean.h.

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The documentation for this class was generated from the following file:

• core/filter/zclean.h